# An example ARTS controlfile that calculates absorption
# coefficients. 
# SAB 16.06.2000

Main {

output_file_formatSetAscii {}

# --------------------< A specific method >--------------------
#                      -------------------
# Read the spectroscopic line data from the ARTS catalogue and
# create the workspace variable `lines'.
linesReadFromArts {
   filename = "data/lines.ac"
   fmin     = 1e9
   fmax     = 200e9
}
# This test catalogue was generated from the HITRAN catalogue in the
# following way:
#linesReadFromHitran {
#        filename = "PATH_TO_ARTS-DATA/spectroscopy/hitran96/hitran96_lowfreq.par"
#        fmin     = 1e9
#        fmax     = 200e9
#}
#linesWriteAscii{"lines.ac"}

AtmosphereSet1D{}

VectorNLogSpace(p_grid){
        start = 100000
        stop  = 10
        n     = 10
}
 
# This defines the list of tag groups (`tag_groups'). Absorption
# coefficients will be calculated separately for each tag group. This
# is necessary in order to calculate weighting functions later on.
# The lines are assigned to the tag groups in the order as the groups
# are specified here. That means if you do ["H2O-181","H2O"], the last
# group H2O gets assigned all the H2O lines that do not fit in the
# first group.
#
# The continuum tags are special, since continua are not added by
# default. Thus, just selecting "H2O" will give you no continuum. 
gas_speciesSet{
      [ "H2O",
        "O3",
        "N2" ] 
}

# Alternatively select all species that we can find in the scenario:
#tgsDefineAllInScenario{"data/tropical"}

# Atmospheric profiles
AtmRawRead {
  basename = "data/tropical"
}

# This separates the lines into the different tag groups and creates
# the workspace variable `lines_per_tg':
lines_per_tgCreateFromLines {}

# Now interpolate all the raw atmospheric input onto the pressure 
# grid and create the atmospheric variables `t_field', `z_field', `vmr_field'
AtmFieldsCalc {}

# Initialize the input variables of absCalc from the Atm fields:
AbsInputFromAtmFields {}

# Set the physical H2O profile from the H2O profile in vmrs:
h2o_absSet {}

# N2 likewise:
n2_absSet {}

# Create the frequency grid `f_grid':
VectorNLinSpace (f_grid) {
        start = 50e9
        stop  = 150e9
        n     = 100    
}

# set the lineshape function for all calculated tags
lineshapeDefine{
        shape = "Voigt_Kuntz6" 
        normalizationfactor = "linear"
        cutoff = -1
}

# or set it separately for each tag
#lineshape_per_tgDefine{
#        shape = [ "Voigt_Kuntz6", "no_shape", "Voigt_Kuntz6", "Voigt_Kuntz6" ]
#        normalizationfactor = [ "quadratic", "no_norm", "linear", "linear" ]
#        cutoff = [ -1, -1, -1, -1 ]
#}

# Formally, we also have to set ContDescription, even though we don't
# have a continuum:
cont_descriptionInit {}

# Calculate absorption coefficients, both total (`abs') and 
# separately for each tag group (`abs_per_tg'):
absCalc {}

# Optionally write these to files:
#WriteXML (abs_t) {"data/simpleAbs.abs_t.xml.generated"}
#WriteXML (vmrs) {"data/simpleAbs.vmrs.xml.generated"}

# This we definitely want to write to file!
WriteXML (abs) {"data/simpleAbs.abs.xml.generated"}
WriteXML (abs_per_tg) {"data/simpleAbs.abs_per_tg.xml.generated"}

}